Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | VAPA_RS35450 | Not Available | Positive | 4987339 - 4987464 | 4759.85 |
| giy-yig nuclease family protein | VAPA_RS34070 | Not Available | Negative | 4987479 - 4989101 | 62088.2 |
| tyrosine-type recombinase/integrase | VAPA_RS23260 | Not Available | Negative | 4989255 - 4990115 | 31860.9 |
| hypothetical protein | VAPA_RS35245 | Not Available | Negative | 4990175 - 4990594 | 15510.7 |
| hypothetical protein | VAPA_RS34570 | Not Available | Positive | 4990674 - 4990844 | 6174.41 |
| sir2 family protein | VAPA_RS23265 | Not Available | Negative | 4990891 - 4994040 | 117499.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | VAPA_RS23270 | Not Available | Positive | 4994288 - 4994524 | 8411.15 |
| nyn domain-containing protein | VAPA_RS23280 | Not Available | Positive | 4995365 - 4996075 | 26018.9 |
| phospholipase d family protein | VAPA_RS23285 | Not Available | Positive | 4996202 - 4997548 | 50895.1 |
| type isp restriction/modification enzyme | VAPA_RS34075 | Not Available | Positive | 4997853 - 5001092 | 121012.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
