Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | VAPA_RS23220 | Not Available | Negative | 4973830 - 4974244 | 15012.9 |
| hypothetical protein | VAPA_RS34045 | Not Available | Negative | 4974258 - 4975073 | 30207.0 |
| excisionase | VAPA_RS34050 | Not Available | Negative | 4975101 - 4975361 | 9716.77 |
| helix-turn-helix domain-containing protein | VAPA_RS23230 | Not Available | Negative | 4976570 - 4977142 | 20637.9 |
| helix-turn-helix domain-containing protein | VAPA_RS23235 | Not Available | Positive | 4977396 - 4977668 | 9952.12 |
| duf3883 domain-containing protein | VAPA_RS23240 | Not Available | Negative | 4977827 - 4978969 | 42738.6 |
| recq family atp-dependent dna helicase | VAPA_RS23245 | Not Available | Positive | 4979109 - 4984286 | 191661.0 |
| aaa family atpase | VAPA_RS34065 | Not Available | Positive | 4984709 - 4986550 | 67737.4 |
| hypothetical protein | VAPA_RS23250 | Not Available | Negative | 4986564 - 4986755 | 6787.17 |
| hypothetical protein | VAPA_RS35445 | Not Available | Positive | 4987007 - 4987129 | 5001.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
