Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS34560 | Not Available | Positive | 4962322 - 4962483 | 5711.93 |
| dna-binding response regulator | VAPA_RS23175 | Not Available | Negative | 4962582 - 4963397 | 29426.2 |
| response regulator transcription factor | VAPA_RS23180 | Not Available | Negative | 4963528 - 4964241 | 25478.8 |
| sensor histidine kinase | VAPA_RS23185 | Not Available | Positive | 4964270 - 4966360 | 77338.9 |
| tonb-dependent receptor | VAPA_RS23190 | Not Available | Negative | 4966529 - 4968844 | 82157.8 |
| pddexk nuclease domain-containing protein | VAPA_RS23195 | Not Available | Positive | 4968829 - 4969869 | 39139.3 |
| yran family protein | VAPA_RS35545 | Not Available | Negative | 4969811 - 4969960 | 5652.81 |
| yran family protein | VAPA_RS23205 | Not Available | Negative | 4970473 - 4971571 | 41036.7 |
| relaxase/mobilization nuclease domain-containing protein | VAPA_RS23210 | Not Available | Negative | 4971662 - 4972768 | 41226.4 |
| hypothetical protein | VAPA_RS35240 | Not Available | Negative | 4972761 - 4973312 | 19769.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
