Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | VAPA_RS23125 | Not Available | Negative | 4946672 - 4947193 | 18930.5 |
| tetr/acrr family transcriptional regulator | VAPA_RS23130 | Not Available | Negative | 4947457 - 4948116 | 24021.3 |
| dapg hydrolase family protein | VAPA_RS23135 | Not Available | Positive | 4948228 - 4948923 | 26230.2 |
| hypothetical protein | VAPA_RS23140 | Not Available | Negative | 4949332 - 4949721 | 14275.3 |
| outer membrane protein assembly factor bame | VAPA_RS23145 | Not Available | Negative | 4949805 - 4950248 | 16604.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | VAPA_RS23150 | Not Available | Negative | 4950304 - 4951536 | 44771.8 |
| type i secretion system permease/atpase | VAPA_RS23155 | Not Available | Negative | 4951533 - 4953725 | 79044.3 |
| tolc family outer membrane protein | VAPA_RS23160 | Not Available | Negative | 4953722 - 4955056 | 46829.2 |
| tandem-95 repeat protein | VAPA_RS33630 | Not Available | Negative | 4955129 - 4960738 | 189726.0 |
| dna-binding response regulator | VAPA_RS23170 | Not Available | Positive | 4961140 - 4961973 | 30129.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
