Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ylci/ynfo family protein | VAPA_RS34910 | Not Available | Positive | 4920669 - 4920950 | 10568.4 |
| type ii toxin-antitoxin system rele/pare family toxin | VAPA_RS23030 | Not Available | Positive | 4920947 - 4921273 | 12661.1 |
| hypothetical protein | VAPA_RS34555 | Not Available | Negative | 4921490 - 4921972 | 17562.9 |
| duf5682 family protein | VAPA_RS23035 | Not Available | Negative | 4921969 - 4924530 | 93433.9 |
| atp-binding protein | VAPA_RS23040 | Not Available | Negative | 4924521 - 4925642 | 40951.0 |
| duf4132 domain-containing protein | VAPA_RS23045 | Not Available | Negative | 4925686 - 4929513 | 140829.0 |
| swim zinc finger domain-containing protein | VAPA_RS23050 | Not Available | Negative | 4929607 - 4931676 | 73408.9 |
| vwa domain-containing protein | VAPA_RS23055 | Not Available | Negative | 4931676 - 4932803 | 41779.5 |
| serine hydrolase | VAPA_RS23060 | Not Available | Positive | 4933765 - 4935186 | 52373.4 |
| duf4238 domain-containing protein | VAPA_RS23065 | Not Available | Negative | 4935489 - 4938002 | 94076.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
