Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | VAPA_RS22980 | Not Available | Negative | 4910345 - 4911616 | 46815.0 |
| oxalyl-coa decarboxylase | VAPA_RS22985 | Not Available | Negative | 4911643 - 4913481 | 64678.9 |
| crp/fnr family transcriptional regulator | VAPA_RS22990 | Not Available | Positive | 4913638 - 4914246 | 23269.5 |
| cytidylate kinase family protein | VAPA_RS22995 | Not Available | Negative | 4914260 - 4915096 | 30610.9 |
| tripartite tricarboxylate transporter permease | VAPA_RS23000 | Not Available | Negative | 4915112 - 4916641 | 53823.8 |
| tripartite tricarboxylate transporter tctb family protein | VAPA_RS23005 | Not Available | Negative | 4916663 - 4917187 | 18895.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS23010 | Not Available | Negative | 4917305 - 4918330 | 36977.0 |
| hypothetical protein | VAPA_RS23015 | Not Available | Positive | 4918645 - 4918881 | 8458.22 |
| Trna-arg | Not Available | Not Available | Positive | 4918934 - 4919008 | Not Available |
| tyrosine-type recombinase/integrase | VAPA_RS23025 | Not Available | Positive | 4919184 - 4920413 | 45406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
