Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase domain-containing abc transporter | VAPA_RS22835 | Not Available | Negative | 4875524 - 4877368 | 66387.9 |
| hypothetical protein | VAPA_RS34030 | Not Available | Negative | 4877449 - 4877730 | 10231.7 |
| glutamate ligase domain-containing protein | VAPA_RS22845 | Not Available | Negative | 4877727 - 4880798 | 112556.0 |
| peptidoglycan-associated lipoprotein pal | VAPA_RS22850 | Not Available | Negative | 4880877 - 4881380 | 18465.8 |
| hypothetical protein | VAPA_RS22855 | Not Available | Negative | 4881460 - 4884510 | 94225.9 |
| duf1841 family protein | VAPA_RS22860 | Not Available | Positive | 4884792 - 4885223 | 16095.9 |
| lysr substrate-binding domain-containing protein | VAPA_RS22865 | Not Available | Negative | 4885335 - 4886330 | 35275.0 |
| protocatechuate 3,4-dioxygenase subunit beta | VAPA_RS22870 | Not Available | Positive | 4886438 - 4887163 | 27290.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | VAPA_RS22875 | Not Available | Positive | 4887183 - 4887791 | 21993.7 |
| c-type cytochrome | VAPA_RS22880 | Not Available | Negative | 4887861 - 4888553 | 24635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
