Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | VAPA_RS22790 | Not Available | Positive | 4864830 - 4865810 | 34970.4 |
| type ii secretion system f family protein | VAPA_RS22795 | Not Available | Positive | 4865807 - 4866772 | 35092.4 |
| tetratricopeptide repeat-containing protein | VAPA_RS22800 | Not Available | Positive | 4866769 - 4867701 | 32910.4 |
| duf3613 domain-containing protein | VAPA_RS34020 | Not Available | Positive | 4867828 - 4868121 | 10312.9 |
| tade/tadg family type iv pilus assembly protein | VAPA_RS22805 | Not Available | Positive | 4868152 - 4868619 | 17065.9 |
| tade/tadg family type iv pilus assembly protein | VAPA_RS22810 | Not Available | Positive | 4868625 - 4869116 | 17657.4 |
| tadg family pilus assembly protein | VAPA_RS34025 | Not Available | Positive | 4869130 - 4871139 | 68831.6 |
| sigma 54-interacting transcriptional regulator | VAPA_RS22820 | Not Available | Positive | 4871158 - 4872591 | 52548.8 |
| tolc family protein | VAPA_RS22825 | Not Available | Negative | 4872619 - 4874172 | 55779.9 |
| hlyd family type i secretion periplasmic adaptor subunit | VAPA_RS22830 | Not Available | Negative | 4874169 - 4875485 | 48008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
