Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS22745 | Not Available | Negative | 4853737 - 4854753 | 34706.4 |
| response regulator transcription factor | VAPA_RS22750 | Not Available | Negative | 4854908 - 4855627 | 25370.0 |
| tetratricopeptide repeat protein | VAPA_RS22755 | Not Available | Positive | 4855979 - 4857166 | 41118.9 |
| murein l,d-transpeptidase family protein | VAPA_RS22760 | Not Available | Positive | 4857166 - 4858584 | 51398.1 |
| flp family type ivb pilin | VAPA_RS34015 | Not Available | Positive | 4859001 - 4859189 | 6417.85 |
| prepilin peptidase | VAPA_RS22765 | Not Available | Positive | 4859194 - 4859712 | 18592.2 |
| flp pilus assembly protein cpab | VAPA_RS22770 | Not Available | Positive | 4859787 - 4860776 | 34163.4 |
| type ii and iii secretion system protein family protein | VAPA_RS22775 | Not Available | Positive | 4860826 - 4862193 | 47475.2 |
| cpae family protein | VAPA_RS22780 | Not Available | Positive | 4862229 - 4863512 | 45536.4 |
| cpaf family protein | VAPA_RS22785 | Not Available | Positive | 4863521 - 4864837 | 48831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
