Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide resistance protein | VAPA_RS22695 | Not Available | Negative | 4846154 - 4846573 | 14467.1 |
| response regulator | VAPA_RS22700 | Not Available | Positive | 4846774 - 4847514 | 27813.9 |
| thioredoxin family protein | VAPA_RS22705 | Not Available | Negative | 4847602 - 4848174 | 21028.1 |
| hypothetical protein | VAPA_RS22710 | Not Available | Positive | 4848376 - 4848627 | 8834.71 |
| redox-sensitive transcriptional activator soxr | VAPA_RS22715 | Not Available | Negative | 4848608 - 4849090 | 17565.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS22720 | Not Available | Negative | 4849138 - 4850112 | 33193.4 |
| 3-oxoadipyl-coa thiolase | VAPA_RS22725 | Not Available | Negative | 4850112 - 4851317 | 41721.3 |
| 3-oxoacid coa-transferase subunit b | VAPA_RS22730 | Not Available | Negative | 4851348 - 4851995 | 22816.7 |
| 3-oxoacid coa-transferase subunit a | VAPA_RS22735 | Not Available | Negative | 4851992 - 4852693 | 24600.7 |
| iclr family transcriptional regulator c-terminal domain-containing protein | VAPA_RS22740 | Not Available | Positive | 4852847 - 4853632 | 28277.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
