Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtcb family protein | VAPA_RS22650 | Not Available | Negative | 4835528 - 4836751 | 44593.7 |
| slipin family protein | VAPA_RS22655 | Not Available | Negative | 4836790 - 4837941 | 42669.9 |
| hypothetical protein | VAPA_RS35440 | Not Available | Negative | 4838423 - 4838545 | 4638.56 |
| rna repair transcriptional activator rtcr | VAPA_RS22660 | Not Available | Positive | 4838633 - 4840243 | 59532.0 |
| voc family protein | VAPA_RS22665 | Not Available | Positive | 4840290 - 4840628 | 12344.6 |
| alpha/beta hydrolase | VAPA_RS22670 | Not Available | Positive | 4840683 - 4841519 | 30442.2 |
| ornithine cyclodeaminase family protein | VAPA_RS22675 | Not Available | Positive | 4841516 - 4842463 | 33041.5 |
| hypothetical protein | VAPA_RS22680 | Not Available | Positive | 4842606 - 4842857 | 9038.73 |
| cytochrome c biogenesis protein dipz | VAPA_RS22685 | Not Available | Negative | 4842901 - 4844709 | 63729.2 |
| atp-binding protein | VAPA_RS22690 | Not Available | Negative | 4844731 - 4846104 | 49819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
