Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | VAPA_RS22600 | Not Available | Positive | 4827210 - 4827737 | 19236.4 |
| voc family protein | VAPA_RS22605 | Not Available | Positive | 4827756 - 4828175 | 15079.2 |
| dha2 family efflux mfs transporter permease subunit | VAPA_RS22610 | Not Available | Positive | 4828212 - 4829702 | 51013.0 |
| duf1428 domain-containing protein | VAPA_RS22615 | Not Available | Positive | 4829767 - 4830126 | 13478.4 |
| sulfite exporter taue/safe family protein | VAPA_RS22620 | Not Available | Negative | 4830142 - 4830900 | 27170.4 |
| doxx family protein | VAPA_RS22625 | Not Available | Positive | 4831128 - 4831604 | 16189.3 |
| crp/fnr family transcriptional regulator | VAPA_RS22630 | Not Available | Negative | 4831617 - 4832360 | 26771.4 |
| adenylate/guanylate cyclase domain-containing protein | VAPA_RS22635 | Not Available | Positive | 4832391 - 4834034 | 59160.0 |
| rna 3'-terminal phosphate cyclase | VAPA_RS22640 | Not Available | Negative | 4834060 - 4835097 | 36154.7 |
| zinc-ribbon domain containing protein | VAPA_RS22645 | Not Available | Negative | 4835094 - 4835471 | 13696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
