Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system protein kefc | VAPA_RS22550 | Not Available | Positive | 4816327 - 4818192 | 67620.3 |
| amidohydrolase family protein | VAPA_RS22555 | Not Available | Negative | 4818193 - 4819059 | 32668.1 |
| crotonase/enoyl-coa hydratase family protein | VAPA_RS22560 | Not Available | Positive | 4819164 - 4819937 | 27589.2 |
| feruloyl-coa synthase | VAPA_RS22565 | Not Available | Positive | 4819934 - 4821787 | 66659.8 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS22570 | Not Available | Positive | 4821810 - 4822574 | 26212.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS22575 | Not Available | Positive | 4822620 - 4823609 | 33940.7 |
| acyl-coa dehydrogenase family protein | VAPA_RS22580 | Not Available | Positive | 4823632 - 4825389 | 63037.6 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS22585 | Not Available | Positive | 4825430 - 4825921 | 17918.7 |
| tetr/acrr family transcriptional regulator | VAPA_RS22590 | Not Available | Negative | 4825937 - 4826599 | 23139.8 |
| voc family protein | VAPA_RS22595 | Not Available | Positive | 4826727 - 4827164 | 15416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
