Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase small assembly protein | VAPA_RS35235 | Not Available | Negative | 4808470 - 4808586 | 4429.63 |
| cytochrome c oxidase subunit i | VAPA_RS22505 | Not Available | Negative | 4808619 - 4810250 | 60496.9 |
| cytochrome c oxidase subunit ii | VAPA_RS22510 | Not Available | Negative | 4810297 - 4811475 | 42777.8 |
| duf2244 domain-containing protein | VAPA_RS22515 | Not Available | Negative | 4811536 - 4812012 | 17520.3 |
| class i sam-dependent methyltransferase | VAPA_RS22520 | Not Available | Negative | 4812181 - 4813095 | 33816.5 |
| comf family protein | VAPA_RS22525 | Not Available | Positive | 4813119 - 4813835 | 25869.3 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | VAPA_RS22530 | Not Available | Positive | 4813865 - 4814326 | 17119.5 |
| maoc family dehydratase | VAPA_RS22535 | Not Available | Negative | 4814335 - 4814805 | 17418.1 |
| para family protein | VAPA_RS22540 | Not Available | Negative | 4814873 - 4815493 | 22732.5 |
| nad(p)h-dependent oxidoreductase | VAPA_RS22545 | Not Available | Positive | 4815584 - 4816324 | 26779.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
