Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | VAPA_RS22455 | Not Available | Negative | 4801209 - 4802048 | 30906.2 |
| sco family protein | VAPA_RS22460 | Not Available | Negative | 4802077 - 4802694 | 21871.3 |
| heme o synthase | VAPA_RS22465 | Not Available | Negative | 4802719 - 4803624 | 33090.3 |
| cox15/ctaa family protein | VAPA_RS22470 | Not Available | Negative | 4803621 - 4804835 | 43135.0 |
| hypothetical protein | VAPA_RS22475 | Not Available | Negative | 4804845 - 4805528 | 25067.3 |
| surf1 family protein | VAPA_RS22480 | Not Available | Negative | 4805512 - 4806321 | 29681.8 |
| twin transmembrane helix small protein | VAPA_RS22485 | Not Available | Positive | 4806358 - 4806579 | 8145.48 |
| cytochrome c oxidase subunit 3 | VAPA_RS22490 | Not Available | Negative | 4806654 - 4807535 | 33009.1 |
| duf2970 domain-containing protein | VAPA_RS22495 | Not Available | Negative | 4807612 - 4807821 | 7542.44 |
| cytochrome c oxidase assembly protein | VAPA_RS22500 | Not Available | Negative | 4807818 - 4808444 | 22881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
