Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse/argo family amino acid transporter | VAPA_RS22405 | Not Available | Negative | 4789970 - 4790605 | 21871.2 |
| lysr family transcriptional regulator argp | VAPA_RS22410 | Not Available | Positive | 4790687 - 4791604 | 32524.2 |
| m16 family metallopeptidase | VAPA_RS22415 | Not Available | Negative | 4791617 - 4792963 | 47716.0 |
| m16 family metallopeptidase | VAPA_RS22420 | Not Available | Negative | 4792981 - 4794447 | 52958.1 |
| signal recognition particle-docking protein ftsy | VAPA_RS22425 | Not Available | Positive | 4794477 - 4795715 | 42738.6 |
| hypothetical protein | VAPA_RS35435 | Not Available | Negative | 4795752 - 4796789 | 35234.2 |
| hybrid sensor histidine kinase/response regulator | VAPA_RS22435 | Not Available | Negative | 4796921 - 4798714 | 65750.2 |
| response regulator transcription factor | VAPA_RS22440 | Not Available | Negative | 4798726 - 4799439 | 24625.7 |
| duf962 domain-containing protein | VAPA_RS22445 | Not Available | Positive | 4799608 - 4800072 | 17143.3 |
| rna polymerase sigma factor rpoh | VAPA_RS22450 | Not Available | Positive | 4800219 - 4801160 | 34516.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
