Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-amino-acid deacylase family protein | VAPA_RS22355 | Not Available | Positive | 4781610 - 4783205 | 56668.6 |
| histidine phosphatase family protein | VAPA_RS22360 | Not Available | Negative | 4783233 - 4783925 | 25679.6 |
| yip1 family protein | VAPA_RS22365 | Not Available | Negative | 4783958 - 4784599 | 22203.2 |
| alpha/beta fold hydrolase | VAPA_RS22370 | Not Available | Positive | 4784743 - 4785444 | 25413.9 |
| pyroglutamyl-peptidase i | VAPA_RS22375 | Not Available | Negative | 4785432 - 4786091 | 23271.2 |
| 5-oxoprolinase subunit pxpa | VAPA_RS22380 | Not Available | Negative | 4786108 - 4786848 | 26240.3 |
| biotin-dependent carboxyltransferase family protein | VAPA_RS22385 | Not Available | Negative | 4786920 - 4787918 | 34679.2 |
| 5-oxoprolinase subunit pxpb | VAPA_RS22390 | Not Available | Negative | 4787915 - 4788580 | 23549.4 |
| pantetheine-phosphate adenylyltransferase | VAPA_RS22395 | Not Available | Negative | 4788724 - 4789227 | 18558.5 |
| rsmd family rna methyltransferase | VAPA_RS22400 | Not Available | Negative | 4789271 - 4789939 | 23190.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
