Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | VAPA_RS22305 | Not Available | Positive | 4771014 - 4771844 | 30069.4 |
| abc transporter substrate-binding protein | VAPA_RS22310 | Not Available | Positive | 4771977 - 4773470 | 54627.3 |
| abc transporter substrate-binding protein | VAPA_RS22315 | Not Available | Positive | 4773673 - 4775160 | 53404.1 |
| amidase | VAPA_RS22320 | Not Available | Positive | 4775157 - 4776569 | 50385.2 |
| helix-turn-helix domain-containing protein | VAPA_RS22325 | Not Available | Positive | 4776651 - 4777094 | 16570.9 |
| hypothetical protein | VAPA_RS35225 | Not Available | Negative | 4777350 - 4777742 | 13953.8 |
| yitt family protein | VAPA_RS22335 | Not Available | Negative | 4778063 - 4778689 | 22576.0 |
| lysr family transcriptional regulator | VAPA_RS22340 | Not Available | Negative | 4778728 - 4779597 | 31155.9 |
| tautomerase family protein | VAPA_RS22345 | Not Available | Positive | 4779709 - 4780107 | 14480.3 |
| tetratricopeptide repeat protein | VAPA_RS22350 | Not Available | Positive | 4780139 - 4781497 | 49287.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
