Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | VAPA_RS22255 | Not Available | Positive | 4763598 - 4764488 | 31898.3 |
| Trna-gln | Not Available | Not Available | Positive | 4764555 - 4764631 | Not Available |
| ribose-phosphate pyrophosphokinase | VAPA_RS22265 | Not Available | Positive | 4764863 - 4765834 | 35106.3 |
| 50s ribosomal protein l25/general stress protein ctc | VAPA_RS22270 | Not Available | Positive | 4765931 - 4766602 | 24097.2 |
| aminoacyl-trna hydrolase | VAPA_RS22275 | Not Available | Positive | 4766677 - 4767309 | 22927.6 |
| hypothetical protein | VAPA_RS22280 | Not Available | Positive | 4767361 - 4767855 | 17894.8 |
| yfhl family 4fe-4s dicluster ferredoxin | VAPA_RS22285 | Not Available | Negative | 4767841 - 4768137 | 10752.8 |
| abc transporter permease | VAPA_RS22290 | Not Available | Positive | 4768200 - 4769150 | 33952.8 |
| abc transporter permease | VAPA_RS22295 | Not Available | Positive | 4769147 - 4770022 | 30750.4 |
| abc transporter atp-binding protein | VAPA_RS22300 | Not Available | Positive | 4770028 - 4771017 | 35165.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
