Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 4752595 - 4752671 | Not Available |
| heat-inducible transcriptional repressor hrca | VAPA_RS22210 | Not Available | Negative | 4752704 - 4753714 | 37112.7 |
| nad kinase | VAPA_RS22215 | Not Available | Positive | 4753743 - 4754654 | 32620.1 |
| dna repair protein recn | VAPA_RS22220 | Not Available | Positive | 4754656 - 4756335 | 59826.8 |
| rnase adapter rapz | VAPA_RS22225 | Not Available | Positive | 4756335 - 4757210 | 32739.2 |
| a/g-specific adenine glycosylase | VAPA_RS22230 | Not Available | Negative | 4757226 - 4758290 | 39066.0 |
| dynamin family protein | VAPA_RS22235 | Not Available | Negative | 4758298 - 4760262 | 73435.2 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | VAPA_RS22240 | Not Available | Negative | 4760352 - 4761164 | 29715.3 |
| tetratricopeptide repeat protein | VAPA_RS22245 | Not Available | Positive | 4761398 - 4763080 | 61850.7 |
| lipoprotein insertase outer membrane protein lolb | VAPA_RS22250 | Not Available | Positive | 4763224 - 4763601 | 13379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
