Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | VAPA_RS22155 | Not Available | Negative | 4743674 - 4744588 | 33028.3 |
| serine/threonine protein kinase | VAPA_RS22160 | Not Available | Negative | 4744585 - 4745592 | 37738.8 |
| yicc/yloc family endoribonuclease | VAPA_RS22165 | Not Available | Positive | 4745684 - 4746598 | 33291.2 |
| guanylate kinase | VAPA_RS22170 | Not Available | Positive | 4746607 - 4747227 | 23059.5 |
| dna-directed rna polymerase subunit omega | VAPA_RS22175 | Not Available | Positive | 4747258 - 4747461 | 7416.32 |
| rela/spot family protein | VAPA_RS22180 | Not Available | Positive | 4747562 - 4749817 | 83242.7 |
| transcription elongation factor greb | VAPA_RS22185 | Not Available | Negative | 4749834 - 4750412 | 21022.5 |
| hypothetical protein | VAPA_RS22190 | Not Available | Negative | 4750449 - 4751576 | 41234.5 |
| adenylyl-sulfate kinase | VAPA_RS22195 | Not Available | Negative | 4751573 - 4752211 | 22858.4 |
| Trna-arg | Not Available | Not Available | Positive | 4752454 - 4752530 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
