Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS22030 | Not Available | Negative | 4722486 - 4722713 | 8239.81 |
| sir2 family nad-dependent protein deacylase | VAPA_RS33990 | Not Available | Negative | 4722838 - 4726407 | 133689.0 |
| mor transcription activator family protein | VAPA_RS33610 | Not Available | Negative | 4726533 - 4726862 | 12071.8 |
| phage terminase large subunit family protein | VAPA_RS22040 | Not Available | Negative | 4726865 - 4728925 | 76332.4 |
| hypothetical protein | VAPA_RS22045 | Not Available | Negative | 4728922 - 4729494 | 20550.1 |
| hypothetical protein | VAPA_RS22050 | Not Available | Negative | 4729625 - 4730404 | 28969.8 |
| helix-turn-helix domain-containing protein | VAPA_RS33615 | Not Available | Negative | 4730401 - 4731324 | 33824.1 |
| phage regulatory cii family protein | VAPA_RS33620 | Not Available | Negative | 4731365 - 4731895 | 19333.0 |
| hypothetical protein | VAPA_RS34545 | Not Available | Positive | 4731894 - 4732178 | 10103.2 |
| hypothetical protein | VAPA_RS22065 | Not Available | Positive | 4732275 - 4732487 | 7954.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
