Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | VAPA_RS21890 | Not Available | Negative | 4691622 - 4692380 | 26855.4 |
| caib/baif coa transferase family protein | VAPA_RS21895 | Not Available | Negative | 4692377 - 4693558 | 42850.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS21900 | Not Available | Negative | 4693560 - 4694534 | 34521.6 |
| lysr family transcriptional regulator | VAPA_RS21905 | Not Available | Negative | 4694678 - 4695568 | 32465.3 |
| reverse transcriptase domain-containing protein | VAPA_RS33980 | Not Available | Negative | 4696388 - 4698148 | 65904.8 |
| hypothetical protein | VAPA_RS33985 | Not Available | Negative | 4698437 - 4699024 | 21050.9 |
| hypothetical protein | VAPA_RS34540 | Not Available | Negative | 4699038 - 4700063 | 38957.0 |
| mrcb family domain-containing protein | VAPA_RS33590 | Not Available | Negative | 4700626 - 4701642 | 37616.9 |
| hypothetical protein | VAPA_RS21920 | Not Available | Positive | 4701763 - 4702143 | 14440.4 |
| hypothetical protein | VAPA_RS21925 | Not Available | Positive | 4702230 - 4702541 | 11390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
