Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | VAPA_RS21795 | Not Available | Negative | 4668993 - 4670150 | 40078.4 |
| nuclease-related domain-containing protein | VAPA_RS21800 | Not Available | Positive | 4670352 - 4671020 | 24706.9 |
| outer membrane protein assembly factor bama | VAPA_RS21805 | Not Available | Positive | 4671095 - 4673497 | 87855.3 |
| response regulator | VAPA_RS21810 | Not Available | Positive | 4673514 - 4674194 | 24721.0 |
| hypothetical protein | VAPA_RS33970 | Not Available | Negative | 4674155 - 4674385 | 7444.15 |
| intradiol ring-cleavage dioxygenase | VAPA_RS21815 | Not Available | Negative | 4674433 - 4675263 | 29151.4 |
| hypothetical protein | VAPA_RS33975 | Not Available | Negative | 4675260 - 4675541 | 10100.2 |
| atp-binding protein | VAPA_RS21825 | Not Available | Positive | 4675694 - 4677283 | 57752.4 |
| response regulator | VAPA_RS21830 | Not Available | Positive | 4677280 - 4677972 | 25952.3 |
| universal stress protein | VAPA_RS21835 | Not Available | Positive | 4678103 - 4678549 | 16002.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
