Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe/urej family protein | VAPA_RS21745 | Not Available | Positive | 4661939 - 4662535 | 19977.2 |
| urease subunit beta | VAPA_RS21750 | Not Available | Positive | 4662544 - 4662849 | 11022.1 |
| urease subunit alpha | VAPA_RS21755 | Not Available | Positive | 4662849 - 4664597 | 62038.0 |
| type ii toxin-antitoxin system death-on-curing family toxin | VAPA_RS21760 | Not Available | Negative | 4664601 - 4665005 | 14523.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | VAPA_RS21765 | Not Available | Negative | 4665002 - 4665229 | 8313.25 |
| urease accessory protein uree | VAPA_RS21770 | Not Available | Positive | 4665301 - 4665903 | 21763.8 |
| urease accessory protein uref | VAPA_RS21775 | Not Available | Positive | 4665969 - 4666640 | 24232.8 |
| urease accessory protein ureg | VAPA_RS21780 | Not Available | Positive | 4666659 - 4667309 | 23519.5 |
| hypothetical protein | VAPA_RS21785 | Not Available | Negative | 4667321 - 4667833 | 17956.5 |
| hypothetical protein | VAPA_RS21790 | Not Available | Negative | 4667989 - 4668612 | 21752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
