Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | VAPA_RS21545 | Not Available | Negative | 4619829 - 4620596 | 28544.1 |
| hypothetical protein | VAPA_RS21550 | Not Available | Negative | 4620757 - 4621032 | 9544.9 |
| glutamyl-trna reductase | VAPA_RS21555 | Not Available | Positive | 4621165 - 4622436 | 45840.2 |
| peptide chain release factor 1 | VAPA_RS21560 | Not Available | Positive | 4622536 - 4623648 | 41095.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | VAPA_RS21565 | Not Available | Positive | 4623645 - 4624502 | 29874.6 |
| grx4 family monothiol glutaredoxin | VAPA_RS21570 | Not Available | Positive | 4624532 - 4624861 | 11976.4 |
| cupin domain-containing protein | VAPA_RS21575 | Not Available | Positive | 4624877 - 4625392 | 18490.6 |
| hemolysin family protein | VAPA_RS21580 | Not Available | Positive | 4625445 - 4626728 | 47822.3 |
| lytic transglycosylase domain-containing protein | VAPA_RS21585 | Not Available | Negative | 4626736 - 4627395 | 24481.6 |
| proline--trna ligase | VAPA_RS21590 | Not Available | Negative | 4627392 - 4629137 | 64005.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
