Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | VAPA_RS21095 | Not Available | Negative | 4529260 - 4529760 | 16373.3 |
| duf429 domain-containing protein | VAPA_RS21100 | Not Available | Negative | 4529889 - 4530743 | 30092.1 |
| dmt family transporter | VAPA_RS21105 | Not Available | Negative | 4530749 - 4531630 | 31504.4 |
| bluf domain-containing protein | VAPA_RS21110 | Not Available | Negative | 4531646 - 4532068 | 15273.4 |
| gtp cyclohydrolase i | VAPA_RS21115 | Not Available | Negative | 4532071 - 4532802 | 27549.4 |
| endonuclease/exonuclease/phosphatase family protein | VAPA_RS21120 | Not Available | Negative | 4532867 - 4533619 | 28229.1 |
| dihydroneopterin triphosphate diphosphatase | VAPA_RS21125 | Not Available | Negative | 4533616 - 4534089 | 17755.1 |
| aspartate--trna ligase | VAPA_RS21130 | Not Available | Negative | 4534097 - 4535902 | 67269.0 |
| duf502 domain-containing protein | VAPA_RS21135 | Not Available | Negative | 4535934 - 4536554 | 22492.9 |
| fmdb family zinc ribbon protein | VAPA_RS21140 | Not Available | Negative | 4536564 - 4536908 | 11146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
