Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | VAPA_RS21045 | Not Available | Positive | 4521372 - 4522127 | 26393.6 |
| asma family protein | VAPA_RS21050 | Not Available | Negative | 4522138 - 4524150 | 70674.9 |
| response regulator | VAPA_RS21055 | Not Available | Positive | 4524384 - 4524788 | 14825.5 |
| response regulator transcription factor | VAPA_RS21060 | Not Available | Negative | 4524841 - 4525473 | 23264.2 |
| chase3 domain-containing protein | VAPA_RS21065 | Not Available | Positive | 4525605 - 4526924 | 48629.6 |
| duf1328 domain-containing protein | VAPA_RS33960 | Not Available | Positive | 4527115 - 4527279 | 5631.37 |
| hypothetical protein | VAPA_RS21075 | Not Available | Positive | 4527334 - 4527708 | 13307.5 |
| phage holin family protein | VAPA_RS21080 | Not Available | Positive | 4527751 - 4528134 | 13280.3 |
| hypothetical protein | VAPA_RS21085 | Not Available | Positive | 4528121 - 4528609 | 18194.8 |
| bacterioferritin | VAPA_RS21090 | Not Available | Positive | 4528606 - 4529166 | 20557.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
