Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | VAPA_RS20995 | Not Available | Positive | 4513526 - 4514164 | 23357.8 |
| 6-carboxytetrahydropterin synthase | VAPA_RS21000 | Not Available | Positive | 4514180 - 4514542 | 13875.6 |
| quinolinate synthase nada | VAPA_RS21005 | Not Available | Negative | 4514582 - 4515706 | 40031.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | VAPA_RS21010 | Not Available | Negative | 4515715 - 4516593 | 30804.0 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | VAPA_RS21015 | Not Available | Negative | 4516632 - 4517666 | 35332.0 |
| protein-export chaperone secb | VAPA_RS21020 | Not Available | Negative | 4517692 - 4518156 | 16955.3 |
| glutaredoxin 3 | VAPA_RS21025 | Not Available | Negative | 4518285 - 4518545 | 9444.58 |
| rhodanese-like domain-containing protein | VAPA_RS21030 | Not Available | Negative | 4518566 - 4518973 | 14243.6 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | VAPA_RS21035 | Not Available | Positive | 4519055 - 4519798 | 27728.9 |
| s41 family peptidase | VAPA_RS21040 | Not Available | Positive | 4519903 - 4521345 | 52307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
