Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa transferase family protein | VAPA_RS20940 | Not Available | Positive | 4504457 - 4505629 | 41898.4 |
| hypothetical protein | VAPA_RS20945 | Not Available | Positive | 4505653 - 4505877 | 6950.51 |
| sulp family inorganic anion transporter | VAPA_RS20950 | Not Available | Positive | 4505962 - 4507635 | 59009.5 |
| is5 family transposase | VAPA_RS34535 | Not Available | Negative | 4507642 - 4508404 | 28813.1 |
| outer membrane protein assembly factor bame | VAPA_RS20965 | Not Available | Negative | 4508457 - 4508930 | 17595.0 |
| duf3460 family protein | VAPA_RS20970 | Not Available | Positive | 4509000 - 4509206 | 8169.72 |
| segregation and condensation protein a | VAPA_RS20975 | Not Available | Positive | 4509274 - 4510110 | 31875.0 |
| l-aspartate oxidase | VAPA_RS20980 | Not Available | Positive | 4510140 - 4511711 | 56721.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | VAPA_RS20985 | Not Available | Positive | 4511783 - 4512673 | 31216.8 |
| pantoate--beta-alanine ligase | VAPA_RS20990 | Not Available | Positive | 4512690 - 4513529 | 31041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
