Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | VAPA_RS20890 | Not Available | Negative | 4494942 - 4495595 | 23022.6 |
| redoxin domain-containing protein | VAPA_RS20895 | Not Available | Positive | 4495673 - 4496323 | 23497.4 |
| phytanoyl-coa dioxygenase family protein | VAPA_RS20900 | Not Available | Negative | 4496259 - 4497047 | 28737.1 |
| yceh family protein | VAPA_RS20905 | Not Available | Negative | 4497064 - 4497762 | 24463.3 |
| phosphodiester glycosidase family protein | VAPA_RS20910 | Not Available | Negative | 4497808 - 4498521 | 25990.6 |
| isocitrate/isopropylmalate dehydrogenase family protein | VAPA_RS20915 | Not Available | Negative | 4498550 - 4499581 | 36619.6 |
| methionine--trna ligase | VAPA_RS20920 | Not Available | Positive | 4499838 - 4501934 | 77049.6 |
| gntr family transcriptional regulator | VAPA_RS20925 | Not Available | Negative | 4501957 - 4502628 | 24244.4 |
| enoyl-coa hydratase/isomerase family protein | VAPA_RS20930 | Not Available | Positive | 4502687 - 4503442 | 27191.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS20935 | Not Available | Positive | 4503489 - 4504460 | 33428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
