Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3305 domain-containing protein | VAPA_RS20840 | Not Available | Negative | 4483326 - 4483895 | 21933.9 |
| abc transporter atp-binding protein | VAPA_RS20845 | Not Available | Negative | 4483932 - 4484723 | 28703.7 |
| molybdate abc transporter substrate-binding protein | VAPA_RS20850 | Not Available | Negative | 4484720 - 4485469 | 26124.6 |
| molybdate abc transporter permease subunit | VAPA_RS20855 | Not Available | Negative | 4485501 - 4486184 | 24010.8 |
| winged helix-turn-helix domain-containing protein | VAPA_RS20860 | Not Available | Negative | 4486295 - 4486642 | 12232.8 |
| formate dehydrogenase subunit alpha | VAPA_RS20865 | Not Available | Negative | 4486724 - 4489597 | 103828.0 |
| nad(p)h-dependent oxidoreductase subunit e | VAPA_RS20870 | Not Available | Negative | 4489594 - 4491339 | 63522.5 |
| lysr substrate-binding domain-containing protein | VAPA_RS20875 | Not Available | Negative | 4491589 - 4492533 | 34288.0 |
| iron-sulfur cluster carrier protein apbc | VAPA_RS20880 | Not Available | Negative | 4492548 - 4493639 | 38369.7 |
| patatin-like phospholipase family protein | VAPA_RS20885 | Not Available | Positive | 4493742 - 4494935 | 42587.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
