Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | VAPA_RS20690 | Not Available | Positive | 4451709 - 4452452 | 27714.6 |
| isopenicillin n synthase family dioxygenase | VAPA_RS20695 | Not Available | Positive | 4452469 - 4453473 | 36665.0 |
| had family hydrolase | VAPA_RS20700 | Not Available | Negative | 4453496 - 4454185 | 24084.1 |
| mfs transporter | VAPA_RS20705 | Not Available | Negative | 4454265 - 4455605 | 47611.0 |
| ubiquinol oxidase subunit ii | VAPA_RS20710 | Not Available | Positive | 4455781 - 4456809 | 38189.4 |
| cytochrome o ubiquinol oxidase subunit i | VAPA_RS20715 | Not Available | Positive | 4456812 - 4458818 | 74752.9 |
| cytochrome o ubiquinol oxidase subunit iii | VAPA_RS20720 | Not Available | Positive | 4458811 - 4459464 | 23652.0 |
| cytochrome o ubiquinol oxidase subunit iv | VAPA_RS20725 | Not Available | Positive | 4459461 - 4459874 | 15002.5 |
| surf1 family protein | VAPA_RS20730 | Not Available | Positive | 4459871 - 4460728 | 30633.0 |
| atp-binding protein | VAPA_RS20735 | Not Available | Positive | 4460712 - 4462133 | 51626.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
