Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | VAPA_RS20590 | Not Available | Positive | 4434035 - 4435012 | 34884.3 |
| l-threonylcarbamoyladenylate synthase | VAPA_RS20595 | Not Available | Positive | 4435029 - 4435664 | 23277.2 |
| site-2 protease family protein | VAPA_RS20600 | Not Available | Positive | 4435708 - 4436379 | 24289.6 |
| tryptophan--trna ligase | VAPA_RS20605 | Not Available | Positive | 4436394 - 4437725 | 48382.7 |
| luxr c-terminal-related transcriptional regulator | VAPA_RS20610 | Not Available | Positive | 4437798 - 4438400 | 21831.3 |
| sensor histidine kinase | VAPA_RS20615 | Not Available | Negative | 4438643 - 4440049 | 51846.2 |
| Trna-ser | Not Available | Not Available | Positive | 4440285 - 4440374 | Not Available |
| serine--trna ligase | VAPA_RS20625 | Not Available | Negative | 4440441 - 4441772 | 48234.7 |
| voc family protein | VAPA_RS20630 | Not Available | Positive | 4441835 - 4442236 | 14219.1 |
| threonine/serine dehydratase | VAPA_RS20635 | Not Available | Negative | 4442244 - 4443206 | 33730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
