Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase d family protein | VAPA_RS20490 | Not Available | Negative | 4411490 - 4413031 | 56054.1 |
| glycerophosphodiester phosphodiesterase family protein | VAPA_RS20495 | Not Available | Negative | 4413028 - 4413798 | 27586.3 |
| abc transporter permease subunit | VAPA_RS20500 | Not Available | Negative | 4413818 - 4414738 | 33894.9 |
| abc transporter permease subunit | VAPA_RS20505 | Not Available | Negative | 4414763 - 4415671 | 33091.3 |
| extracellular solute-binding protein | VAPA_RS20510 | Not Available | Negative | 4415703 - 4417031 | 49527.8 |
| iron-containing alcohol dehydrogenase | VAPA_RS20515 | Not Available | Negative | 4417078 - 4418430 | 47405.8 |
| sugar-binding transcriptional regulator | VAPA_RS20520 | Not Available | Positive | 4418582 - 4419544 | 34529.9 |
| mfs transporter | VAPA_RS20525 | Not Available | Negative | 4419556 - 4420830 | 43037.4 |
| urea abc transporter atp-binding subunit urte | VAPA_RS20530 | Not Available | Negative | 4420952 - 4421644 | 25260.1 |
| urea abc transporter atp-binding protein urtd | VAPA_RS20535 | Not Available | Negative | 4421657 - 4422535 | 31857.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
