Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS20440 | Not Available | Positive | 4402166 - 4402726 | 20397.4 |
| prsw family intramembrane metalloprotease | VAPA_RS20445 | Not Available | Positive | 4402723 - 4403916 | 44337.8 |
| extensin family protein | VAPA_RS20450 | Not Available | Positive | 4404036 - 4404299 | 9333.22 |
| hypothetical protein | VAPA_RS20455 | Not Available | Negative | 4404348 - 4404743 | 13407.9 |
| serine hydrolase domain-containing protein | VAPA_RS20460 | Not Available | Positive | 4405103 - 4406668 | 55989.3 |
| duf938 domain-containing protein | VAPA_RS20465 | Not Available | Negative | 4406671 - 4407291 | 22287.7 |
| response regulator transcription factor | VAPA_RS20470 | Not Available | Negative | 4407342 - 4407986 | 23195.3 |
| cache domain-containing protein | VAPA_RS20475 | Not Available | Negative | 4407991 - 4409355 | 50434.4 |
| vtt domain-containing protein | VAPA_RS35425 | Not Available | Negative | 4409433 - 4410371 | 33070.2 |
| aldo/keto reductase | VAPA_RS20485 | Not Available | Negative | 4410411 - 4411421 | 36784.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
