Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | VAPA_RS20390 | Not Available | Negative | 4392375 - 4393211 | 30279.4 |
| duf1161 domain-containing protein | VAPA_RS20395 | Not Available | Negative | 4393226 - 4393558 | 11056.2 |
| sel1 repeat-containing protein | VAPA_RS20400 | Not Available | Negative | 4393677 - 4394096 | 15089.1 |
| tonb-dependent receptor | VAPA_RS20405 | Not Available | Negative | 4394216 - 4396369 | 78467.7 |
| ybdd/yjix family protein | VAPA_RS20410 | Not Available | Negative | 4396579 - 4396785 | 7658.27 |
| carbon starvation csta family protein | VAPA_RS20415 | Not Available | Negative | 4396796 - 4398862 | 73444.4 |
| hypothetical protein | VAPA_RS20420 | Not Available | Negative | 4398971 - 4399375 | 16031.9 |
| is1380 family transposase | VAPA_RS20425 | Not Available | Positive | 4399612 - 4400925 | 48855.3 |
| c40 family peptidase | VAPA_RS20430 | Not Available | Negative | 4401097 - 4401618 | 17948.7 |
| duf1801 domain-containing protein | VAPA_RS20435 | Not Available | Negative | 4401628 - 4402050 | 15074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
