Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | VAPA_RS20340 | Not Available | Positive | 4382567 - 4383091 | 18717.8 |
| urease accessory protein ured | VAPA_RS20345 | Not Available | Positive | 4383128 - 4383958 | 30348.3 |
| lysr family transcriptional regulator | VAPA_RS20350 | Not Available | Negative | 4383974 - 4384840 | 31779.8 |
| nad(p)-dependent oxidoreductase | VAPA_RS20355 | Not Available | Positive | 4384969 - 4385841 | 30602.4 |
| dmt family transporter | VAPA_RS20360 | Not Available | Positive | 4385844 - 4386773 | 32054.4 |
| lysr substrate-binding domain-containing protein | VAPA_RS20365 | Not Available | Negative | 4386804 - 4387676 | 31816.7 |
| mercaptosuccinate dioxygenase | VAPA_RS20370 | Not Available | Positive | 4387785 - 4388375 | 21477.5 |
| rhodanese-like domain-containing protein | VAPA_RS20375 | Not Available | Positive | 4388463 - 4390049 | 56919.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS20380 | Not Available | Positive | 4390110 - 4391120 | 35185.3 |
| cystathionine beta-lyase | VAPA_RS20385 | Not Available | Positive | 4391156 - 4392358 | 43303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
