Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | VAPA_RS20290 | Not Available | Positive | 4375565 - 4375978 | 14863.7 |
| oxidoreductase-like domain-containing protein | VAPA_RS20295 | Not Available | Negative | 4375986 - 4376240 | 8867.57 |
| lipid a hydroxylase lpxo | VAPA_RS20300 | Not Available | Negative | 4376283 - 4377179 | 34599.6 |
| nad(p)-dependent oxidoreductase | VAPA_RS20305 | Not Available | Negative | 4377325 - 4378194 | 30149.3 |
| winged helix-turn-helix transcriptional regulator | VAPA_RS20310 | Not Available | Positive | 4378319 - 4378651 | 12464.2 |
| osmc family protein | VAPA_RS20315 | Not Available | Negative | 4378668 - 4379066 | 14609.5 |
| winged helix-turn-helix transcriptional regulator | VAPA_RS20320 | Not Available | Negative | 4379122 - 4379589 | 17501.6 |
| d-amino acid dehydrogenase | VAPA_RS20325 | Not Available | Positive | 4379718 - 4381019 | 47043.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | VAPA_RS20330 | Not Available | Negative | 4381032 - 4382114 | 40777.4 |
| hypothetical protein | VAPA_RS20335 | Not Available | Positive | 4382391 - 4382570 | 6641.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
