Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | VAPA_RS20240 | Not Available | Positive | 4366117 - 4367031 | 33359.5 |
| trap transporter small permease | VAPA_RS20245 | Not Available | Positive | 4367057 - 4367671 | 22806.9 |
| trap transporter large permease | VAPA_RS20250 | Not Available | Positive | 4367673 - 4368938 | 44444.0 |
| trap transporter substrate-binding protein | VAPA_RS20255 | Not Available | Positive | 4368987 - 4369985 | 35511.2 |
| abc transporter substrate-binding protein | VAPA_RS20260 | Not Available | Positive | 4370199 - 4371233 | 36359.0 |
| abc transporter atp-binding protein | VAPA_RS20265 | Not Available | Positive | 4371233 - 4372090 | 32070.0 |
| abc transporter permease | VAPA_RS20270 | Not Available | Positive | 4372100 - 4372870 | 28048.2 |
| nucleoside deaminase | VAPA_RS20275 | Not Available | Positive | 4372881 - 4373363 | 17565.0 |
| abc transporter substrate-binding protein | VAPA_RS20280 | Not Available | Positive | 4373544 - 4374572 | 36272.3 |
| isopenicillin n synthase family dioxygenase | VAPA_RS20285 | Not Available | Positive | 4374579 - 4375568 | 35787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
