Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | VAPA_RS20190 | Not Available | Positive | 4353467 - 4354171 | 25559.6 |
| ai-2e family transporter | VAPA_RS20195 | Not Available | Positive | 4354265 - 4355347 | 39005.7 |
| duf2141 domain-containing protein | VAPA_RS20200 | Not Available | Positive | 4355524 - 4355955 | 14881.6 |
| carotenoid oxygenase family protein | VAPA_RS20205 | Not Available | Positive | 4355969 - 4357468 | 54522.3 |
| lysr family transcriptional regulator | VAPA_RS20210 | Not Available | Negative | 4357487 - 4358389 | 32924.9 |
| glyoxylate carboligase | VAPA_RS20215 | Not Available | Positive | 4358501 - 4360294 | 64919.4 |
| hydroxypyruvate isomerase | VAPA_RS20220 | Not Available | Positive | 4360308 - 4361087 | 28531.1 |
| 2-hydroxy-3-oxopropionate reductase | VAPA_RS20225 | Not Available | Positive | 4361116 - 4362024 | 31173.0 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS20230 | Not Available | Negative | 4362028 - 4363362 | 50214.2 |
| nadp-dependent malic enzyme | VAPA_RS20235 | Not Available | Positive | 4363584 - 4365887 | 82102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
