Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | VAPA_RS20040 | Not Available | Positive | 4321304 - 4322581 | 44560.2 |
| trap transporter substrate-binding protein | VAPA_RS20045 | Not Available | Positive | 4322608 - 4323645 | 37955.6 |
| sdr family oxidoreductase | VAPA_RS20050 | Not Available | Positive | 4323642 - 4324424 | 27278.9 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS20055 | Not Available | Positive | 4324421 - 4325221 | 27908.9 |
| oxaloacetate decarboxylase | VAPA_RS20060 | Not Available | Positive | 4325226 - 4326095 | 30469.7 |
| dihydrodipicolinate synthase family protein | VAPA_RS20065 | Not Available | Positive | 4326150 - 4327067 | 32636.7 |
| aminotransferase class v-fold plp-dependent enzyme | VAPA_RS20070 | Not Available | Negative | 4327070 - 4328371 | 47138.4 |
| amino acid abc transporter substrate-binding protein | VAPA_RS20075 | Not Available | Negative | 4328374 - 4329267 | 32203.8 |
| lysr family transcriptional regulator | VAPA_RS20080 | Not Available | Positive | 4329400 - 4330320 | 34001.4 |
| set domain-containing protein | VAPA_RS20085 | Not Available | Positive | 4330353 - 4330823 | 16914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
