Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS19940 | Not Available | Positive | 4300635 - 4301624 | 34672.8 |
| acyl-coa thioesterase | VAPA_RS19945 | Not Available | Positive | 4301665 - 4302084 | 15739.8 |
| hypothetical protein | VAPA_RS19950 | Not Available | Positive | 4302106 - 4302309 | 7266.79 |
| hypothetical protein | VAPA_RS19955 | Not Available | Positive | 4302673 - 4302897 | 8246.71 |
| magnesium-translocating p-type atpase | VAPA_RS19960 | Not Available | Positive | 4303111 - 4305795 | 97322.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | VAPA_RS19965 | Not Available | Negative | 4306184 - 4307626 | 50715.0 |
| glycerate kinase | VAPA_RS19970 | Not Available | Negative | 4307994 - 4309334 | 46388.5 |
| helix-turn-helix domain-containing protein | VAPA_RS34890 | Not Available | Positive | 4309487 - 4309930 | 16570.9 |
| is630 family transposase | VAPA_RS34895 | Not Available | Positive | 4309930 - 4310601 | 25834.4 |
| urate hydroxylase puud | VAPA_RS19985 | Not Available | Negative | 4310606 - 4311811 | 45073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
