Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | VAPA_RS19895 | Not Available | Negative | 4281245 - 4282564 | 46408.8 |
| non-ribosomal peptide synthetase | VAPA_RS19900 | Not Available | Negative | 4282583 - 4290079 | 270566.0 |
| hypothetical protein | VAPA_RS34525 | Not Available | Negative | 4290155 - 4290340 | 6754.27 |
| nramp family divalent metal transporter | VAPA_RS19905 | Not Available | Negative | 4290502 - 4291755 | 45389.3 |
| lysr family transcriptional regulator | VAPA_RS19910 | Not Available | Negative | 4291856 - 4292773 | 34145.6 |
| group ii intron reverse transcriptase/maturase | VAPA_RS19915 | Not Available | Negative | 4292942 - 4294450 | 57242.4 |
| pqq-dependent sugar dehydrogenase | VAPA_RS19920 | Not Available | Positive | 4294854 - 4296053 | 43755.0 |
| c-type cytochrome | VAPA_RS19925 | Not Available | Positive | 4296050 - 4296703 | 22809.2 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | VAPA_RS19930 | Not Available | Positive | 4296813 - 4298972 | 77516.5 |
| indolepyruvate oxidoreductase subunit beta family protein | VAPA_RS19935 | Not Available | Positive | 4298984 - 4300606 | 57835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
