Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VAPA_RS19795 | Not Available | Negative | 4257689 - 4258591 | 33164.5 |
| zinc-dependent alcohol dehydrogenase family protein | VAPA_RS19800 | Not Available | Positive | 4258731 - 4259744 | 35649.1 |
| amylo-alpha-1,6-glucosidase | VAPA_RS19805 | Not Available | Negative | 4259790 - 4260974 | 44332.9 |
| glxa family transcriptional regulator | VAPA_RS19810 | Not Available | Negative | 4260961 - 4261959 | 35711.7 |
| dj-1/pfpi family protein | VAPA_RS19815 | Not Available | Positive | 4262001 - 4263137 | 40087.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS19820 | Not Available | Negative | 4263165 - 4264127 | 33380.4 |
| amidohydrolase family protein | VAPA_RS19825 | Not Available | Negative | 4264152 - 4265021 | 31501.3 |
| coa transferase | VAPA_RS19830 | Not Available | Negative | 4265031 - 4266224 | 42976.4 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS19835 | Not Available | Negative | 4266243 - 4267235 | 34260.6 |
| hpch/hpai aldolase/citrate lyase family protein | VAPA_RS19840 | Not Available | Negative | 4267275 - 4268144 | 29972.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
