Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VAPA_RS19695 | Not Available | Negative | 4236038 - 4237027 | 35829.4 |
| acyl-coa dehydrogenase family protein | VAPA_RS19700 | Not Available | Positive | 4237137 - 4238369 | 43299.5 |
| abc transporter substrate-binding protein | VAPA_RS19705 | Not Available | Positive | 4238366 - 4239346 | 34741.7 |
| putative cysteine dioxygenase | VAPA_RS19710 | Not Available | Positive | 4239343 - 4239960 | 22222.2 |
| rhodanese-related sulfurtransferase | VAPA_RS19715 | Not Available | Positive | 4239957 - 4241582 | 58310.2 |
| hypothetical protein | VAPA_RS19720 | Not Available | Positive | 4241718 - 4241939 | 7989.67 |
| dead/deah box helicase | VAPA_RS19725 | Not Available | Negative | 4241952 - 4243412 | 53477.8 |
| neutral zinc metallopeptidase | VAPA_RS19730 | Not Available | Negative | 4243544 - 4244431 | 31479.8 |
| dctp deaminase | VAPA_RS19735 | Not Available | Negative | 4244531 - 4245097 | 21209.2 |
| guanine deaminase | VAPA_RS19740 | Not Available | Negative | 4245177 - 4246463 | 46617.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
