Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4123 domain-containing protein | VAPA_RS19645 | Not Available | Positive | 4224014 - 4225090 | 39512.4 |
| t6ss effector bth_i2691 family protein | VAPA_RS19650 | Not Available | Positive | 4225107 - 4227788 | 96830.3 |
| duf6708 domain-containing protein | VAPA_RS19655 | Not Available | Positive | 4227798 - 4228916 | 42871.6 |
| abc transporter substrate-binding protein | VAPA_RS19660 | Not Available | Negative | 4228992 - 4229957 | 33817.6 |
| c-type cytochrome | VAPA_RS19665 | Not Available | Negative | 4229987 - 4231156 | 41392.2 |
| abc transporter atp-binding protein | VAPA_RS19670 | Not Available | Negative | 4231158 - 4231955 | 28773.8 |
| abc transporter permease | VAPA_RS19675 | Not Available | Negative | 4231949 - 4233031 | 38550.4 |
| abc transporter substrate-binding protein | VAPA_RS19680 | Not Available | Negative | 4233028 - 4234041 | 36150.4 |
| class ii aldolase/adducin family protein | VAPA_RS19685 | Not Available | Negative | 4234064 - 4234888 | 30141.7 |
| llm class flavin-dependent oxidoreductase | VAPA_RS19690 | Not Available | Negative | 4234892 - 4236001 | 40801.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
