Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobw family gtp-binding protein | VAPA_RS19595 | Not Available | Positive | 4210809 - 4211753 | 32872.5 |
| gnat family n-acetyltransferase | VAPA_RS19600 | Not Available | Positive | 4211805 - 4212269 | 17519.7 |
| hypothetical protein | VAPA_RS19605 | Not Available | Negative | 4212297 - 4212641 | 11367.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | VAPA_RS19610 | Not Available | Positive | 4212902 - 4216036 | 99273.0 |
| fabp family protein | VAPA_RS19615 | Not Available | Negative | 4216062 - 4216721 | 24260.6 |
| hemolysin family protein | VAPA_RS19620 | Not Available | Negative | 4216769 - 4218079 | 47202.2 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | VAPA_RS19625 | Not Available | Positive | 4218103 - 4218954 | 30369.6 |
| gnat family n-acetyltransferase | VAPA_RS19630 | Not Available | Negative | 4218961 - 4219677 | 27017.1 |
| plp-dependent aminotransferase family protein | VAPA_RS19635 | Not Available | Positive | 4219811 - 4221289 | 53669.8 |
| type vi secretion system vgr family protein | VAPA_RS19640 | Not Available | Positive | 4221628 - 4224009 | 87145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
