Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | VAPA_RS19495 | Not Available | Positive | 4186876 - 4188534 | 59888.4 |
| mfs transporter | VAPA_RS19500 | Not Available | Positive | 4188531 - 4189844 | 47092.8 |
| helix-turn-helix transcriptional regulator | VAPA_RS19505 | Not Available | Negative | 4190146 - 4190631 | 17562.2 |
| duf1059 domain-containing protein | VAPA_RS19510 | Not Available | Positive | 4190887 - 4191108 | 7784.14 |
| (2fe-2s)-binding protein | VAPA_RS19515 | Not Available | Positive | 4191295 - 4191798 | 17364.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | VAPA_RS19520 | Not Available | Positive | 4191795 - 4194053 | 79414.8 |
| c-type cytochrome | VAPA_RS19525 | Not Available | Positive | 4194050 - 4195357 | 46495.7 |
| lysr family transcriptional regulator | VAPA_RS19530 | Not Available | Positive | 4195428 - 4196456 | 37623.3 |
| abc transporter permease subunit | VAPA_RS19535 | Not Available | Negative | 4196368 - 4197216 | 31043.1 |
| taurine abc transporter atp-binding protein | VAPA_RS19540 | Not Available | Negative | 4197245 - 4198033 | 28596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
