Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VAPA_RS19395 | Not Available | Positive | 4162745 - 4163686 | 34197.9 |
| exem/nuch family extracellular endonuclease | VAPA_RS19400 | Not Available | Positive | 4163828 - 4166632 | 95134.4 |
| gntr family transcriptional regulator | VAPA_RS19405 | Not Available | Negative | 4166642 - 4167412 | 28532.4 |
| uxaa family hydrolase | VAPA_RS19410 | Not Available | Positive | 4167539 - 4167820 | 10253.5 |
| uxaa family hydrolase | VAPA_RS19415 | Not Available | Positive | 4167873 - 4169048 | 42181.4 |
| hydroxyacid dehydrogenase | VAPA_RS19420 | Not Available | Positive | 4169074 - 4170003 | 32247.1 |
| ldh family oxidoreductase | VAPA_RS19425 | Not Available | Positive | 4170000 - 4171001 | 34307.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS19430 | Not Available | Positive | 4171048 - 4172040 | 34826.6 |
| acetate/propionate family kinase | VAPA_RS19435 | Not Available | Negative | 4172024 - 4173217 | 41710.0 |
| sulfoacetaldehyde acetyltransferase | VAPA_RS19440 | Not Available | Negative | 4173226 - 4175049 | 65714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
